Genome Biology - oalib

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ISSN: 2333-9721
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Genome Biology

ISSN Print: 1465-6906

ISSN Online:

主页: http://genomebiology.com

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Functions, structure, and read-through alternative splicing of feline APOBEC3 genes

Carsten Münk, Thomas Beck, J？rg Zielonka, Agnes Hotz-Wagenblatt, Sarah Chareza, Marion Battenberg, Jens Thielebein, Klaus Cichutek, Ignacio G Bravo, Stephen J O'Brien, Martin Lochelt, Naoya Yuhki

Bilateral olfaction: two is better than one for navigation

Baranidharan Raman, Iori Ito, Mark Stopfer

DNA signatures for detecting genetic engineering in bacteria

Jonathan E Allen, Shea N Gardner, Tom R Slezak

Erect wing regulates synaptic growth in Drosophila by integration of multiple signaling pathways

Irmgard U Haussmann, Kalpana White, Matthias Soller

Plant immunity from A to Z

Silke Robatzek, Yusuke Saijo

Horizontal gene transfer and the evolution of transcriptional regulation in Escherichia coli

Morgan N Price, Paramvir S Dehal, Adam P Arkin

Whole genome functional analysis identifies novel components required for mitotic spindle integrity in human cells

Daniel R Rines, Maria Gomez-Ferreria, Yingyao Zhou, Paul DeJesus, Seanna Grob, Serge Batalov, Marc Labow, Dieter Huesken, Craig Mickanin, Jonathan Hall, Mischa Reinhardt, Francois Natt, Joerg Lange, David J Sharp, Sumit K Chanda, Jeremy S Caldwell

Construction, alignment and analysis of twelve framework physical maps that represent the ten genome types of the genus Oryza

HyeRan Kim, Bonnie Hurwitz, Yeisoo Yu, Kristi Collura, Navdeep Gill, Phillip SanMiguel, James C Mullikin, Christopher Maher, William Nelson, Marina Wissotski, Michele Braidotti, David Kudrna, José Goicoechea, Lincoln Stein, Doreen Ware, Scott A Jackson, Carol Soderlund, Rod A Wing

Ancora: a web resource for exploring highly conserved noncoding elements and their association with developmental regulatory genes

P？r G Engstr？m, David Fredman, Boris Lenhard

Text-mining assisted regulatory annotation

Stein Aerts, Maximilian Haeussler, Steven van Vooren, Obi L Griffith, Paco Hulpiau, Steven JM Jones, Stephen B Montgomery, Casey M Bergman, The Open Regulatory Annotation Consortium

GMODWeb: a web framework for the generic model organism database

Brian D O'Connor, Allen Day, Scott Cain, Olivier Arnaiz, Linda Sperling, Lincoln D Stein

Genome wide prediction of HNF4α functional binding sites by the use of local and global sequence context

Alexander E Kel, Monika Niehof, Volker Matys, Rüdiger Zemlin, Jürgen Borlak

Transcriptional analysis of highly syntenic regions between Medicago truncatula and Glycine max using tiling microarrays

Lei Li, Hang He, Juan Zhang, Xiangfeng Wang, Sulan Bai, Viktor Stolc, Waraporn Tongprasit, Nevin D Young, Oliver Yu, Xing-Wang Deng

Proteomic view of mitochondrial function

Kai Dimmer, Doron Rapaport

On the nature of thumbs

Günter P Wagner, Alexander O Vargas

An improved method for detecting and delineating genomic regions with altered gene expression in cancer

Bj？rn Nilsson, Mikael Johansson, Anders Heyden, Sven Nelander, Thoas Fioretos

The SeqFEATURE library of 3D functional site models: comparison to existing methods and applications to protein function annotation

Shirley Wu, Mike P Liang, Russ B Altman

Intron mis-splicing: no alternative?

Scott Roy, Manuel Irimia

Natural selection of protein structural and functional properties: a single nucleotide polymorphism perspective

Jinfeng Liu, Yan Zhang, Xingye Lei, Zemin Zhang

The topless plant developmental phenotype explained!

Karen S Osmont, Christian S Hardtke

Maize genome in motion

Virginia Walbot

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

Brian J Haas, Steven L Salzberg, Wei Zhu, Mihaela Pertea, Jonathan E Allen, Joshua Orvis, Owen White, C Robin Buell, Jennifer R Wortman

The tryptophan pathway genes of the Sargasso Sea metagenome: new operon structures and the prevalence of non-operon organization

Juliana Kagan, Itai Sharon, Oded Beja, Jonathan C Kuhn

ModuleMiner - improved computational detection of cis-regulatory modules: are there different modes of gene regulation in embryonic development and adult tissues?

Peter Van Loo, Stein Aerts, Bernard Thienpont, Bart De Moor, Yves Moreau, Peter Marynen

It is alive

Gregory A Petsko

The ethics of characterizing difference: guiding principles on using racial categories in human genetics

Sandra Lee, Joanna Mountain, Barbara Koenig, Russ Altman, Melissa Brown, Albert Camarillo, Luca Cavalli-Sforza, Mildred Cho, Jennifer Eberhardt, Marcus Feldman, Richard Ford, Henry Greely, Roy King, Hazel Markus, Debra Satz, Matthew Snipp, Claude Steele, Peter Underhill

Modulation of gene expression in drug resistant Leishmania is associated with gene amplification, gene deletion and chromosome aneuploidy

Jean-Michel Ubeda, Danielle Légaré, Frédéric Raymond, Amin Ouameur, Sébastien Boisvert, Philippe Rigault, Jacques Corbeil, Michel J Tremblay, Martin Olivier, Barbara Papadopoulou, Marc Ouellette

Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge

Martin Krallinger, Alexander Morgan, Larry Smith, Florian Leitner, Lorraine Tanabe, John Wilbur, Lynette Hirschman, Alfonso Valencia

Circular reasoning rather than cyclic expression

Lars Jensen, Ulrik de Lichtenberg, Thomas Jensen, S？ren Brunak, Peer Bork

Innate recognition of non-self nucleic acids

Hongbo Chi, Richard A Flavell

Going to the dogs

Gregory A Petsko

Human-macaque comparisons illuminate variation in neutral substitution rates

Svitlana Tyekucheva, Kateryna D Makova, John E Karro, Ross C Hardison, Webb Miller, Francesca Chiaromonte

Visualization of pseudogenes in intracellular bacteria reveals the different tracks to gene destruction

Hans-Henrik Fuxelius, Alistair C Darby, Nam-Huyk Cho, Siv GE Andersson

Translational control plays a prominent role in the hepatocytic differentiation of HepaRG liver progenitor cells

Romain Parent, Laura Beretta

The AAA+ superfamily of functionally diverse proteins

Jamie Snider, Guillaume Thibault, Walid A Houry

Probing the cancer genome

Heidi Greulich

Comparative hybridization reveals extensive genome variation in the AIDS-associated pathogen Cryptococcus neoformans

Guanggan Hu, Iris Liu, Anita Sham, Jason E Stajich, Fred S Dietrich, James W Kronstad

Hominoid chromosomal rearrangements on 17q map to complex regions of segmental duplication

Maria Cardone, Zhaoshi Jiang, Pietro D'Addabbo, Nicoletta Archidiacono, Mariano Rocchi, Evan E Eichler, Mario Ventura

Exploring systemic RNA interference in insects: a genome-wide survey for RNAi genes in Tribolium

Yoshinori Tomoyasu, Sherry C Miller, Shuichiro Tomita, Michael Schoppmeier, Daniela Grossmann, Gregor Bucher

Systematic analysis of transcribed loci in ENCODE regions using RACE sequencing reveals extensive transcription in the human genome

Jia Wu, Jiang Du, Joel Rozowsky, Zhengdong Zhang, Alexander E Urban, Ghia Euskirchen, Sherman Weissman, Mark Gerstein, Michael Snyder

All systems are go

Claire E Eyers, Onrapak Reamtong

Organization of the pronephric kidney revealed by large-scale gene expression mapping

Daniela Raciti, Luca Reggiani, Lars Geffers, Qiuhong Jiang, Francesca Bacchion, Astrid E Subrizi, Dave Clements, Christopher Tindal, Duncan R Davidson, Brigitte Kaissling, André W Br？ndli

Widespread duplications in the genomes of laboratory stocks of Dictyostelium discoideum

Gareth Bloomfield, Yoshimasa Tanaka, Jason Skelton, Alasdair Ivens, Robert R Kay

Prioritizing functional modules mediating genetic perturbations and their phenotypic effects: a global strategy

Li Wang, Fengzhu Sun, Ting Chen

Protein structure protection commits gene expression patterns

Jianping Chen, Han Liang, Ariel Fernández

Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana

Joost JB Keurentjes, Ronan Sulpice, Yves Gibon, Marie-Caroline Steinhauser, Jingyuan Fu, Maarten Koornneef, Mark Stitt, Dick Vreugdenhil

Ch？tognath transcriptome reveals ancestral and unique features among bilaterians

Ferdinand Marlétaz, André Gilles, Xavier Caubit, Yvan Perez, Carole Dossat, Sylvie Samain, Gabor Gyapay, Patrick Wincker, Yannick Le Parco

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