Genome Biology - oalib

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ISSN: 2333-9721
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Genome Biology

ISSN Print: 1465-6906

ISSN Online:

主页: http://genomebiology.com

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Guilt by association

Gregory A Petsko

The Cell Cycle Ontology: an application ontology for the representation and integrated analysis of the cell cycle process

Erick Antezana, Mikel Ega？a, Ward Blondé, Aitzol Illarramendi, I？aki Bilbao, Bernard De Baets, Robert Stevens, Vladimir Mironov, Martin Kuiper

Evaluation of next generation sequencing platforms for population targeted sequencing studies

Olivier Harismendy, Pauline C Ng, Robert L Strausberg, Xiaoyun Wang, Timothy B Stockwell, Karen Y Beeson, Nicholas J Schork, Sarah S Murray, Eric J Topol, Samuel Levy, Kelly A Frazer

What my genome told me - and what it didn't

Gregory A Petsko

Improved base calling for the Illumina Genome Analyzer using machine learning strategies

Martin Kircher, Udo Stenzel, Janet Kelso

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

Simon M Dittami, Delphine Scornet, Jean-Louis Petit, Béatrice Ségurens, Corinne Da Silva, Erwan Corre, Michael Dondrup, Karl-Heinz Glatting, Rainer K？nig, Lieven Sterck, Pierre Rouzé, Yves Van de Peer, J Mark Cock, Catherine Boyen, Thierry Tonon

A transcriptional network associated with natural variation in Drosophila aggressive behavior

Alexis C Edwards, Julien F Ayroles, Eric A Stone, Mary Carbone, Richard F Lyman, Trudy FC Mackay

Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data

Piotr J Balwierz, Piero Carninci, Carsten O Daub, Jun Kawai, Yoshihide Hayashizaki, Werner Van Belle, Christian Beisel, Erik van Nimwegen

Characterization of taxonomically restricted genes in a phylum-restricted cell type

Sabine Milde, Georg Hemmrich, Friederike Anton-Erxleben, Konstantin Khalturin, J？rg Wittlieb, Thomas CG Bosch

DNA breaks as triggers for antigenic variation in African trypanosomes

Sam Alsford, David Horn, Lucy Glover

Evolving proteins at Darwin's bicentenary

John W Pinney, Michael PH Stumpf

Genomic parasites and genome evolution

Zoltán Ivics

A hidden reservoir of integrative elements is the major source of recently acquired foreign genes and ORFans in archaeal and bacterial genomes

Diego Cortez, Patrick Forterre, Simonetta Gribaldo

Interfacing systems biology and synthetic biology

Allyson Lister, Varodom Charoensawan, Subhajyoti De, Katherine James, Sarath Chandra Janga, Julian Huppert

Genetics and genomics converge on the human blood fluke

Andy Tait

Origin of nascent lineages and the mechanisms used to prime second-strand DNA synthesis in the R1 and R2 retrotransposons of Drosophila

Deborah E Stage, Thomas H Eickbush

Building bridges from 'omics' to cell biology

Brian Cox

PDGF/VEGF signaling controls cell size in Drosophila

David Sims, Peter Duchek, Buzz Baum

SEPALLATA3: the 'glue' for MADS box transcription factor complex formation

Richard GH Immink, Isabella AN Tonaco, Stefan de Folter, Anna Shchennikova, Aalt DJ van Dijk, Jacqueline Busscher-Lange, Jan W Borst, Gerco C Angenent

A genome-wide genetic signature of Jewish ancestry perfectly separates individuals with and without full Jewish ancestry in a large random sample of European Americans

Anna C Need, Dalia Kasperavi？iūt？, Elizabeth T Cirulli, David B Goldstein

High tandem repeat content in the genome of the short-lived annual fish Nothobranchius furzeri: a new vertebrate model for aging research

Kathrin Reichwald, Chris Lauber, Indrajit Nanda, Jeanette Kirschner, Nils Hartmann, Susanne Schories, Ulrike Gausmann, Stefan Taudien, Markus B Schilhabel, Karol Szafranski, Gernot Gl？ckner, Michael Schmid, Alessandro Cellerino, Manfred Schartl, Christoph Englert, Matthias Platzer

Community-wide analysis of microbial genome sequence signatures

Gregory J Dick, Anders F Andersson, Brett J Baker, Sheri L Simmons, Brian C Thomas, A Pepper Yelton, Jillian F Banfield

Sequence patches on MAPK surfaces define protein-protein interactions

Gary L Johnson, Shawn M Gomez

The WASP and WAVE family proteins

Shusaku Kurisu, Tadaomi Takenawa

Motif composition, conservation and condition-specificity of single and alternative transcription start sites in the Drosophila genome

Elizabeth A Rach, Hsiang-Yu Yuan, William H Majoros, Pavel Tomancak, Uwe Ohler

Motifs and cis-regulatory modules mediating the expression of genes co-expressed in presynaptic neurons

Rui Liu, Sridhar Hannenhalli, Maja Bucan

Rac and Rho driving tumor invasion: who's at the wheel?

Marc Symons, Jeffrey E Segall

Ribosomal footprints on a transcriptome landscape

David R Morris

Back to Bermuda: how is science best served?

Deanna M Church, LaDeana W Hillier

A whole-genome assembly of the domestic cow, Bos taurus

Aleksey V Zimin, Arthur L Delcher, Liliana Florea, David R Kelley, Michael C Schatz, Daniela Puiu, Finnian Hanrahan, Geo Pertea, Curtis P Van Tassell, Tad S Sonstegard, Guillaume Mar？ais, Michael Roberts, Poorani Subramanian, James A Yorke, Steven L Salzberg

Systemic analysis of the response of Aspergillus niger to ambient pH

Mikael R Andersen, Linda Lehmann, Jens Nielsen

Co-evolutionary networks of genes and cellular processes across fungal species

Tamir Tuller, Martin Kupiec, Eytan Ruppin

The need for speed

Paul Flicek

Yeasts as models in evolutionary biology

Zhenglong Gu, Stephen Oliver

Correction: Reactome: a knowledge base of biologic pathways and processes

Imre Vastrik, Peter D'Eustachio, Esther Schmidt, Gopal Gopinath, David Croft, Bernard de Bono, Marc Gillespie, Bijay Jassal, Suzanna Lewis, Lisa Matthews, Guanming Wu, Ewan Birney, Lincoln Stein

Integrating sequence, evolution and functional genomics in regulatory genomics

Martin Vingron, Alvis Brazma, Richard Coulson, Jacques van Helden, Thomas Manke, Kimmo Palin, Olivier Sand, Esko Ukkonen

Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations

Tom M Conrad, Andrew R Joyce, M Kenyon Applebee, Christian L Barrett, Bin Xie, Yuan Gao, Bernhard ？ Palsson

Floral induction and monocarpic versus polycarpic life histories

Richard Amasino

Simultaneous alignment of short reads against multiple genomes

Korbinian Schneeberger, J？rg Hagmann, Stephan Ossowski, Norman Warthmann, Sandra Gesing, Oliver Kohlbacher, Detlef Weigel

A cell surface interaction network of neural leucine-rich repeat receptors

Christian S？llner, Gavin J Wright

Biology inspires engineering

Reine Byun, Attila Becskei

Fast genomic μChIP-chip from 1,000 cells

John Arne Dahl, Andrew H Reiner, Philippe Collas

Depletion of T-cell intracellular antigen proteins promotes cell proliferation

Raquel Reyes, José Alcalde, José M Izquierdo

Predicting drug side-effects by chemical systems biology

Nicholas P Tatonetti, Tianyun Liu, Russ B Altman

Common variants in polygenic schizophrenia

Joseph T Glessner, Hakon Hakonarson

New tricks for an old-favorite model

Charalampos Rallis

Enrichment of sequencing targets from the human genome by solution hybridization

Ryan Tewhey, Masakazu Nakano, Xiaoyun Wang, Carlos Pabón-Pe？a, Barbara Novak, Angelica Giuffre, Eric Lin, Scott Happe, Doug N Roberts, Emily M LeProust, Eric J Topol, Olivier Harismendy, Kelly A Frazer

Unraveling the genomic diversity of small eukaryotes

Gilles Fischer, Dawn Thompson, Jennifer Wortman, Cécile Fairhead

Evolutionary rates and centrality in the yeast gene regulatory network

Richard Jovelin, Patrick C Phillips

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