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Quantitative Biology

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主页: http://arxiv.org/archive/q-bio

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A Model of the Ebola Epidemics in West Africa Incorporating Age of Infection

G. F. Webb,C. J. Browne

Is there contextuality in behavioral and social systems?

Ehtibar Dzhafarov,Ru Zhang,Janne Kujala

A predictive coding account of OCD

P. J. Moore

Rate of Adaptive Evolution under Blending Inheritance

Alan R. Rogers

A Touch of Sleep: Biophysical Model of Contact-mediated Dormancy of Archaea by Viruses

Hayriye Gulbudak,Joshua S. Weitz

On the roles of hunting and habitat size on the extinction of megafauna

Guillermo Abramson,María F. Laguna,Marcelo N. Kuperman,Adrián Monjeau,José L. Lanata

Regulación de especies competitivas bajo modelos impulsivos de pesca-siembra regidos por operadores maximales

Romina Cardo,Alvaro Corvalán

On the Origin of Risk Sensitivity: the Energy Budget Rule Revisited

Ik Soo Lim,Peter Wittek,John Parkinson

Backward bifurcation underlies rich dynamics in simple disease models

Wenjing Zhang,Pei Yu,Lindi M. Wahl

Almost all random graphs are amplifiers of selection for Birth-death dynamics, but suppressors of selection for death-Birth dynamics

Laura Hindersin,Arne Traulsen

Evolutionarily induced alternative states and coexistence in systems with apparent competition

Sebastian J. Schreiber,Swati Patel

Epigenetics: What it is about?

Evelyne Saade,Vasily Ogryzko

CABS-dock web server for the flexible docking of peptides to proteins without prior knowledge of the binding site

Mateusz Kurcinski,Michal Jamroz,Maciej Blaszczyk,Andrzej Kolinski,Sebastian Kmiecik

Asymptotic properties of the number of matching coalescent histories for caterpillar-like families of species trees

Filippo Disanto,Noah A. Rosenberg

Modeling ant battles by means of a diffusion-limited Gillespie algorithm

Gianluca Martelloni,Alisa Santarlasci,Franco Bagnoli,Giacomo Santini

MULTILAND: a neutral landscape generator designed for theoretical studies

Lionel Roques

Activity of any neuron with delayed feedback stimulated with Poisson stream is non-Markov

Alexander K. Vidybida

Efficient computation of the joint sample frequency spectra for multiple populations

John A. Kamm,Jonathan Terhorst,Yun S. Song

Genetic structure of Sino-Tibetan populations revealed by forensic STR loci

Hong-Bing Yao,Chuan-Chao Wang,Jiang Wang,Xiaolan Tao,Shao-Qing Wen,Qiajun Du,Qiongying Deng,Bingying Xu,Ying Huang,Hong-Dan Wang,Shujin Li,Bin Cong,Liying Ma,Li Jin,Johannes Krause,Hui Li

Shadows of the SIS immortality transition in small networks

Petter Holme

A piecewise deterministic model for prey-predator communities

Manon Costa

Characterization of the infectious reservoir of malaria with an agent-based model calibrated to age-stratified parasite densities and infectiousness

Jaline Gerardin,Andre Lin Ouedraogo,Kevin A. McCarthy,Bocar Kouyate,Philip A. Eckhoff,Edward A. Wenger

On Eigen's quasispecies model, two-valued fitness landscapes, and isometry groups acting on finite metric spaces

Yuri S. Semenov,Artem S. Novozhilov

Assessing the robustness of parsimonious predictions for gene neighborhoods from reconciled phylogenies

Ashok Rajaraman,Cedric Chauve,Yann Ponty

Shared intentions and the advance of cumulative culture in hunter-gatherers

Simon D. Angus,Jonathan Newton

Spatial model predicts dispersal and cell turnover cause reduced intra-tumor heterogeneity

Bartlomiej Waclaw,Ivana Bozic,Meredith E. Pittman,Ralph H. Hruban,Bert Vogelstein,Martin A. Nowak

Of fishes and birthdays: Efficient estimation of polymer configurational entropies

Ilya Nemenman,Michael E. Wall,Charlie E. Strauss

From Chemically to Physically Induced Pluripotency in Stem Cell

Liaofu Luo

An investigation into inter- and intragenomic variations of graphic genomic signatures

Rallis Karamichalis,Lila Kari,Stavros Konstantinidis,Steffen Kopecki

The phenotypic equilibrium of cancer cells: From average-level stability to path-wise convergence

Yuanling Niu,Yue Wang,Da Zhou

Phen-Gen: combining phenotype and genotype to analyze rare disorders

Asif Javed,Saloni Agrawal,Pauline C. Ng

Differential protein expression and peak selection in mass spectrometry data by binary discriminant analysis

Sebastian Gibb,Korbinian Strimmer

Transcriptomic and metabolomic analysis of copper stress acclimation in Ectocarpus siliculosus highlights signaling and tolerance mechanisms in brown algae

Andrés Ritter,Simon M Dittami,Sophie Goulitquer,Juan A Correa,Catherine Boyen,Philippe Potin,Thierry Tonon

Estimating the Attack Ratio of Dengue Epidemics under Time-varying Force of Infection using Aggregated Notification Data

Flavio Coelho,Luiz Max Carvalho

Reconstruction of recurrent synaptic connectivity of thousands of neurons from simulated spiking activity

Yury V. Zaytsev,Abigail Morrison,Moritz Deger

The Organisation of the Elderly Connectome

Alistair Perry,Wei Wen,Anton Lord,Anbupalam Thalamuthu,Perminder Sachdev,Michael Breakspear

Dwelling Quietly in the Rich Club: Brain Network Determinants of Slow Cortical Fluctuations

Leonardo L. Gollo,Andrew Zalesky,R. Matthew Hutchison,Martijn van den Heuvel,Michael Breakspear

Adaptive Synchronization and Anticipatory Dynamical System

Ying-Jen Yang,Chun-Chung Chen,Pik-Yin Lai,C. K. Chan

Solitary electromechanical pulses in Lobster neurons

Alfredo Gonzalez-Perez,Lars D. Mosgaard,Rima Budvytyte,Edgar Villagran-Vargas,Andrew D. Jackson,Thomas Heimburg

Modeling networks of spiking neurons as interacting processes with memory of variable length

A. Galves,E. L？cherbach

On inferring structural connectivity from brain functional-MRI data

Somwrita Sarkar,Sanjay Chawla,Donna Xu

A Rich Spectrum of Neural Field Dynamics in the Presence of Short-Term Synaptic Depression

He Wang,Kin Lam,C. C. Alan Fung,K. Y. Michael Wong,Si Wu

Stimulus-Dependent Frequency Modulation of Information Transmission in Neural Systems

Lianchun Yu,Longfei Wang,Fei Jia,Duojie Jia

Quantum Criticality at the Origin of Life

Gabor Vattay,Dennis Salahub,Istvan Csabai,Ali Nassimi,Stuart A. Kaufmann

Scaling from traits to ecosystems: Developing a general Trait Driver Theory via integrating trait-based and metabolic scaling theories

Brian J. Enquist,Jon Norberg,Stephen P. Bonser,Cyrille Violle,Colleen T. Webb,Amanda Henderson,Lindsey L. Sloat,Van M. Savage

Pervasive adaptation of gene expression in Drosophila

Armita Nourmohammad,Joachim Rambeau,Torsten Held,Johannes Berg,Michael Lassig

Allometry and growth of eight tree taxa in United Kingdom woodlands

Matthew R. Evans,Aristides Moustakas,Gregory Carey,Yadvinder Malhi,Nathalie Butt,Sue Benham,Denise Pallett,Stefanie Schaefer

Simple rules for establishment of effective marine protected areas in the age-structured metapopulation dynamics

Nao Takashina

Statistical mechanics and thermodynamics of viral evolution

Barbara A. Jones,Justin Lessler,Simone Bianco,James H. Kaufman

Analysis of single particle trajectories: when things go wrong

D. Holcman,N. Hoze,Z. Schuss

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