Quantitative Biology - oalib

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Quantitative Biology

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主页: http://arxiv.org/archive/q-bio

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Robust and probabilistic optimization of dose schedules in radiotherapy

Hamidreza Badri,Yoichi Watanabe,Kevin Leder

Sufficient conditions for the additivity of stall forces generated by multiple filaments or motors

Tripti Bameta,Dipjyoti Das,Dibyendu Das,Ranjith Padinhateeri,Mandar M. Inamdar

Generation of stable overlaps between antiparallel filaments

D. Johann,D. Goswami,K. Kruse

Quantifying protein diffusion and capture on filaments

Emanuel Reithmann,Louis Reese,Erwin Frey

Solid friction between soft filaments

Andrew Ward,Feodor Hilitski,Walter Schwenger,David Welch,A. W. C. Lau,Vincenzo Vitelli,L. Mahadevan,Zvonimir Dogic

Contributions to the Theory of Thermostated Systems II: Least Dissipation of Helmholtz Free Energy in Nano-Biology

Ronald F. Fox

Spatial organization of bacterial transcription and translation

Michele Castellana,Ned S. Wingreen

CoMEt: A Statistical Approach to Identify Combinations of Mutually Exclusive Alterations in Cancer

Mark D. M. Leiserson,Hsin-Ta Wu,Fabio Vandin,Benjamin J. Raphael

Pitch Perfect: How Fruit Flies Control their Body Pitch Angle

Samuel C. Whitehead,Tsevi Beatus,Luca Canale,Itai Cohen

Variable Viscosity and Density Biofilm Simulations using an Immersed Boundary Method, Part II: Experimental Validation and the Heterogeneous Rheology-IBM

Jay A. Stotsky,Jason F. Hammond,Leonid Pavlovsky,Elizabeth J. Stewart,John G. Younger,Michael J. Solomon,David M. Bortz

Continuous Time Random Walk and Migration Proliferation Dichotomy

A. Iomin

Quantum delocalization directs antenna absorption to photosynthetic reaction centers

Felipe Caycedo-Soler,Chris A. Schroeder,Caroline Autenrieth,Robin Ghosh,Susana F. Huelga,Martin B. Plenio

Probing DNA interactions with proteins using a single-molecule toolbox: inside the cell, in a test tube, and in a computer

Adam J. M. Wollman,Helen Miller,Zhaokun Zhou,Mark C. Leake

A neuron inspired model for the time constant of dynamical systems

S. H. Sabzpoushana,A. Ghajarjazyb,M. Nadjafikhahc

The Origin of Inference: Ediacaran Ecology and the Evolution of Bayesian Brains

Michael G. Paulin

Fast Sparsely Synchronized Brain Rhythms in A Scale-Free Neural Network

Sang-Yoon Kim,Woochang Lim

Learning in Neural Networks Based on a Generalized Fluctuation Theorem

Takashi Hayakawa,Toshio Aoyagi

Dependence of DNA persistence length on ionic strength of solutions with monovalent and divalent salts: a joint theory-experiment study

Anna？l Brunet,Catherine Tardin,Laurence Salomé,Philippe Rousseau,Nicolas Destainville,Manoel Manghi

Separable time-causal and time-recursive spatio-temporal receptive fields

Tony Lindeberg

Beyond two-stage models for lung carcinogenesis in the Mayak workers: Implications for Plutonium risk

Sascha Z？llner,Mikhail E. Sokolnikov,Markus Eidemüller

Impact of density-dependent migration flows on epidemic outbreaks in heterogeneous metapopulations

Jordi Ripoll,Albert Avinyó,Marta Pellicer,Joan Salda？a

When the mean is not enough: Calculating fixation time distributions in birth-death processes

Peter Ashcroft,Arne Traulsen,Tobias Galla

A Macroscopic Behavioral Violation of No Signaling In Time Inequalities

Patrizio Tressoldi,Markus A. Maier,Vanessa L. Büechner,Andrei Khrennikov

A stochastic system with infinite interacting components to model the time evolution of the membrane potentials of a population of neurons

Karina Y. Yaginuma

Modeling neural activity at the ensemble level

Joaquin Rapela,Mark Kostuk,Peter F. Rowat,Tim Mullen,Edward F. Chang,Kristofer Bouchard

Has wild poliovirus been eliminated from Nigeria?

Michael Famulare

Pairwise-like models for non-Markovian epidemics on networks

Istvan Z. Kiss,Gergely R？st,Zsolt Vizi

Spatiotemporal pattern formation in a prey-predator model under environmental driving forces

Anuj Kumar Sirohi,Malay Banerjee,Anirban Chakraborti

A commentary on the mathematical model of the heterogeneous gypsy moth larva population by G. Dwyer and his co-authors

Artem S. Novozhilov

Reply to Mills et al.: Oceanic Anoxic Event, a mechanism for selecting animals with the ability to survive hypoxic conditions

Francois Saint-Antonin

Evolutionary games of condensates in coupled birth-death processes

Johannes Knebel,Markus F. Weber,Torben Krueger,Erwin Frey

Cooperative Intergroup Mating Can Overcome Ethnocentrism in Diverse Populations

Caitlin J. Mouri,Thomas R. Shultz

Critical Fitness Collapse in Three-Dimensional Spatial Population Genetics

Maxim O. Lavrentovich

Reply to Saint-Antonin: Low-oxygen-tolerant animals predate oceanic anoxic events

Daniel B. Mills,Lewis M. Ward,CarriAyne Jones,Brittany Sweeten,Michael Forth,Alexander H. Treusch,Donald E. Canfield

Genome-wide modelling of transcription kinetics reveals patterns of RNA production delays

Antti Honkela,Jaakko Peltonen,Hande Topa,Iryna Charapitsa,Filomena Matarese,Korbinian Grote,Hendrik G. Stunnenberg,George Reid,Neil D. Lawrence,Magnus Rattray

Hox genes underlie metazoan development, but what controls them?

Raffaele Di Giacomo,Bruno Maresca,Jeffrey H. Schwartz

The "Giant Virus Finder" Discovers an Abundance of Giant Viruses in the Antarctic Dry Valleys

Csaba Kerepesi,Vince Grolmusz

Analysis of whole mitogenomes from ancient samples

Gloria G. Fortes,Johanna L. A. Paijmans

The extrinsic noise effect on lateral inhibition differentiation waves

Andreas I. Reppas,Georgios Lolas,Andreas Deutsch,Haralampos Hatzikirou

Inferring maps of forces inside cell membrane microdomains

J. -B. Masson,D. Casanova,S. Tuerkcan,G. Voisinne,M. R. Popoff,M. Vergassola,A. Alexandrou

Sequence determines degree of knottedness in a coarse-grained protein model

Thomas Wüst,Daniel Reith,Peter Virnau

Reliable scaling of Position Weight Matrices for binding strength comparisons between transcription factors

Xiaoyan Ma,Daphne Ezer,Carmen Navarro,Boris Adryan

Consistency of VDJ rearrangement and substitution parameters enables accurate B cell receptor sequence annotation

Duncan K. Ralph,Frederick A. Matsen IV

Developmental time windows for axon growth influence neuronal network topology

Sol Lim,Marcus Kaiser

Existence of Traveling Waves in a Neural Model

Stuart Hastings

Reorganization of functionally connected brain subnetworks in high-functioning autism

Enrico Glerean,Raj Kumar Pan,Juha Salmi,Rainer Kujala,Juha Lahnakoski,Ulrika Roine,Lauri Nummenmaa,Sami Lepp？m？ki,Taina Nieminen-von Wendt,Pekka Tani,Jari Saram？ki,Mikko Sams,Iiro P. J？？skel？inen

Extensive fitness and human cooperation

J. H. van Hateren

Generalized modeling of empirical social-ecological systems

Steven J. Lade,Susa Niiranen,Maja Schlüter

Using genetic data to estimate diffusion rates in heterogeneous landscapes

L. Roques,E. Walker,P. Franck,S. Soubeyrand,E. K. Klein

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